Transcript: lnc-CAMSAP2-1:8

Basic information

LNCipedia transcript ID: lnc-CAMSAP2-1:8 
LNCipedia gene ID: lnc-CAMSAP2-1
Location (hg38): chr1:200675057-200694254
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 678 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260088.1|ENCT00000016054.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.3116 non-coding 
CPAT coding probability 2.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAMSAP2-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAMSAP2-1:8
5.0 lnc-CAMSAP2-1:8
5.1 lnc-ADORA1-71:6
5.2 lnc-CAMSAP2-1:8