Transcript: lnc-CAND2-2:1

Basic information

LNCipedia transcript ID: lnc-CAND2-2:1 
LNCipedia gene ID: lnc-CAND2-2
Location (hg38): chr3:13012981-13015807
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2522 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000499738; NONHSAT088293
Alternative gene names: ENSG00000246066; AC069271.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 19.6455 non-coding 
CPAT coding probability 9.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAND2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CAND2-2:1
3.1 lnc-CAND2-2:1
4.0 lnc-CAND2-2:1
4.1 lnc-CAND2-2:1
5.0 lnc-CAND2-2:1
5.1 lnc-MKRN2-8:6
5.2 lnc-CAND2-2:1