Transcript: lnc-CAPS-2:5

Basic information

LNCipedia transcript ID: lnc-CAPS-2:5 
LNCipedia gene ID: lnc-CAPS-2
Location (hg38): chr19:5978383-5982659
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2290 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000266983.1|ENCT00000201040.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.7457 non-coding 
CPAT coding probability 0.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CAPS-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CAPS-2:5
5.0 lnc-CAPS-2:5
5.1 lnc-RPL36-14:2
5.2 lnc-CAPS-2:5