Transcript: lnc-CARD11-22:8

Basic information

LNCipedia transcript ID: lnc-CARD11-22:8 
LNCipedia gene ID: lnc-CARD11-22
Location (hg38): chr7:3140194-3158342
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 308 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00013677
Alternative gene names: XLOC_006339; linc-CARD11-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -271.0264 non-coding 
CPAT coding probability 2.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARD11-22:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC091801.1.1-1:2
3.1 lnc-AC091801.1.1-1:2
4.0 lnc-AC091801.1.1-1:2
4.1 lnc-AC091801.1.1-1:2
5.0 lnc-AC091801.1.1-1:2
5.1 lnc-GRIFIN-22:8
5.2 lnc-CARD11-22:8