Transcript: lnc-CARD11-22:9

Basic information

LNCipedia transcript ID: lnc-CARD11-22:9 
LNCipedia gene ID: lnc-CARD11-22
Ensembl Gene ID: ENSG00000217455
Ensembl Transcript ID: ENST00000457522
Location (hg38): chr7:3140920-3158255
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 399 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457522.4
Alternative gene names: ENSG00000217455.8; AC091801.1; AC073316.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -214.5053 non-coding 
CPAT coding probability 1.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARD11-22:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC091801.1.1-1:8
4.1 lnc-AC091801.1.1-1:8
5.0 lnc-AC091801.1.1-1:8
5.1 lnc-GRIFIN-22:9
5.2 lnc-CARD11-22:9