Transcript: lnc-CARF-1:1

Basic information

LNCipedia transcript ID: lnc-CARF-1:1 
LNCipedia gene ID: lnc-CARF-1
Location (hg38): chr2:202987513-202988263
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 751 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT076474
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.3811 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CARF-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ALS2CR8-1:1
4.0 lnc-ALS2CR8-1:1
4.1 lnc-ALS2CR8-1:1
5.0 lnc-ALS2CR8-1:1
5.1 lnc-NOP58-20:1
5.2 lnc-CARF-1:1