Transcript: lnc-CARS2-2:3

Basic information

LNCipedia transcript ID: lnc-CARS2-2:3 
LNCipedia gene ID: lnc-CARS2-2
Location (hg38): chr13:110641419-110665750
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3225 bp
Exons: 9
Sources: NONCODE v4
Alternative transcript names: NONHSAT035159
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 811.9214 coding 
CPAT coding probability 41.63% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CARS2-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB20-2:2
4.0 lnc-RAB20-2:2
4.1 lnc-RAB20-2:2
5.0 lnc-RAB20-2:2
5.1 lnc-COL4A1-12:2
5.2 lnc-CARS2-2:3