Transcript: lnc-CATIP-4:1

Basic information

LNCipedia transcript ID: lnc-CATIP-4:1 
LNCipedia gene ID: lnc-CATIP-4
Location (hg38): chr2:218316728-218318008
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 248 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT076903
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -165.173 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CATIP-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPBAR1-4:2
4.0 lnc-GPBAR1-4:2
4.1 lnc-GPBAR1-4:2
5.0 lnc-GPBAR1-4:2
5.1 lnc-TMEM169-58:2
5.2 lnc-CATIP-4:1