Transcript: lnc-CBARP-6:2

Basic information

LNCipedia transcript ID: lnc-CBARP-6:2 
LNCipedia gene ID: lnc-CBARP-6
Location (hg38): chr19:1274747-1275379
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 633 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000039989.1|FTMT27400000126.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBARP-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C19orf26-6:2
5.0 lnc-C19orf26-6:2
5.1 lnc-ZNF77-111:2
5.2 lnc-CBARP-6:2