Transcript: lnc-CBLL1-1:2

Basic information

LNCipedia transcript ID: lnc-CBLL1-1:2 
LNCipedia gene ID: lnc-CBLL1-1
Location (hg38): chr7:107742817-107744128
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 657 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000457510.1; AC002467.7-003; OTTHUMT00000337145.1; NONHSAT122709
Alternative gene names: ENSG00000241764.1; AC002467.7; OTTHUMG00000154805.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -40.8213 non-coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBLL1-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLL1-1:2
4.0 lnc-CBLL1-1:2
4.1 lnc-CBLL1-1:2
5.0 lnc-CBLL1-1:2
5.1 lnc-KMT2E-48:2
5.2 lnc-CBLL1-1:2