Transcript: lnc-CBLN2-1:1

Basic information

LNCipedia transcript ID: lnc-CBLN2-1:1 
LNCipedia gene ID: lnc-CBLN2-1
Ensembl Gene ID: ENSG00000265579
Ensembl Transcript ID: ENST00000584727
Location (hg38): chr18:72743756-72745961
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2206 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584727.1; RP11-713C5.1-001; OTTHUMT00000444209.1; NONHSAT059811
Alternative gene names: ENSG00000265579.1; RP11-713C5.1; OTTHUMG00000178982.1; AC023301.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -119.082 non-coding 
CPAT coding probability 5.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBLN2-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLN2-1:1
4.0 lnc-CBLN2-1:1
4.1 lnc-CBLN2-1:1
5.0 lnc-CBLN2-1:1
5.1 lnc-PQLC1-72:2
5.2 lnc-CBLN2-1:1