Transcript: lnc-CBR3-1:8

Basic information

LNCipedia transcript ID: lnc-CBR3-1:8 
LNCipedia gene ID: lnc-CBR3-1
Location (hg38): chr21:36104629-36112291
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5205 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233393.1|HBMT00000920363.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 47.5013 non-coding 
CPAT coding probability 3.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CBR3-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CBR3-1:8
5.0 lnc-CBR3-1:8
5.1 lnc-SIM2-26:3
5.2 lnc-CBR3-1:8