Transcript: lnc-CBX4-4:2

Basic information

LNCipedia transcript ID: lnc-CBX4-4:2 
LNCipedia gene ID: lnc-CBX4-4
Location (hg38): chr17:79936752-79937193
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 442 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT056326
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.3925 non-coding 
CPAT coding probability 17.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CBX4-4:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TBC1D16-2:2
4.0 lnc-TBC1D16-2:2
4.1 lnc-TBC1D16-2:2
5.0 lnc-TBC1D16-2:2
5.1 lnc-SGSH-15:2
5.2 lnc-CBX4-4:2