Transcript: lnc-CCAR2-2:6

Basic information

LNCipedia transcript ID: lnc-CCAR2-2:6 
LNCipedia gene ID: lnc-CCAR2-2
Location (hg38): chr8:22739515-22758415
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2211 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253125.1|ENCT00000422917.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -100.3351 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCAR2-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA1967-2:8
5.0 lnc-KIAA1967-2:8
5.1 lnc-RHOBTB2-18:6
5.2 lnc-CCAR2-2:6