Transcript: lnc-CCDC102B-11:2

Basic information

LNCipedia transcript ID: lnc-CCDC102B-11:2 
LNCipedia gene ID: lnc-CCDC102B-11
RefSeq ID: NR_134579
Location (hg38): chr18:69469931-69471736
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 347 bp
Exons: 2
Sources: NONCODE v4; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT059752; NR_134579.1
Alternative gene names: LOC105372179


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -340.2296 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC102B-11:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC102B-11:2
4.0 lnc-CCDC102B-11:2
4.1 lnc-CCDC102B-11:2
5.0 lnc-CCDC102B-11:2
5.1 lnc-KCNG2-98:2
5.2 lnc-CCDC102B-11:2