Transcript: lnc-CCDC103-5:3

Basic information

LNCipedia transcript ID: lnc-CCDC103-5:3 
LNCipedia gene ID: lnc-CCDC103-5
Location (hg38): chr17:44941525-44941964
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 440 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_7232_+
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -179.9435 non-coding 
CPAT coding probability 2.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC103-5:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC103-5:1
4.0 lnc-FAM187A-5:1
4.1 lnc-FAM187A-5:1
5.0 lnc-FAM187A-5:1
5.1 lnc-CCDC103-5:2
5.2 lnc-CCDC103-5:3