Transcript: lnc-CCDC117-1:6

Basic information

LNCipedia transcript ID: lnc-CCDC117-1:6 
LNCipedia gene ID: lnc-CCDC117-1
Location (hg38): chr22:28800574-28804529
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3956 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT084656
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.6468 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC117-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC117-1:6
4.0 lnc-CCDC117-1:6
4.1 lnc-CCDC117-1:6
5.0 lnc-CCDC117-1:6
5.1 lnc-OSBP2-35:1
5.2 lnc-CCDC117-1:6