Transcript: lnc-CCDC117-1:8

Basic information

LNCipedia transcript ID: lnc-CCDC117-1:8 
LNCipedia gene ID: lnc-CCDC117-1
Location (hg38): chr22:28821712-28822218
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 365 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA915:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -125.4912 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC117-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CCDC117-1:8
4.1 lnc-CCDC117-1:8
5.0 lnc-CCDC117-1:8
5.1 lnc-OSBP2-35:15
5.2 lnc-CCDC117-1:8