Transcript: lnc-CCDC12-1:6

Basic information

LNCipedia transcript ID: lnc-CCDC12-1:6 
LNCipedia gene ID: lnc-CCDC12-1
Location (hg38): chr3:46921748-46924159
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2412 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT089464
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.3796 non-coding 
CPAT coding probability 40.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC12-1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYL3-1:6
4.0 lnc-CCDC12-1:6
4.1 lnc-CCDC12-1:6
5.0 lnc-CCDC12-1:6
5.1 lnc-TMEM89-42:5
5.2 lnc-CCDC12-1:6