Transcript: lnc-CCDC140-1:15

Basic information

LNCipedia transcript ID: lnc-CCDC140-1:15 
LNCipedia gene ID: lnc-CCDC140-1
RefSeq ID: NR_136642
Location (hg38): chr2:222318471-222357910
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5440 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_136642.1
Alternative gene names: LOC440934


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 255.3145 coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC140-1:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-MOGAT1-10:6
5.1 lnc-MOGAT1-10:6
5.2 lnc-CCDC140-1:15