Transcript: lnc-CCDC144A-2:1

Basic information

LNCipedia transcript ID: lnc-CCDC144A-2:1 
LNCipedia gene ID: lnc-CCDC144A-2
Ensembl Gene ID: ENSG00000264765
Ensembl Transcript ID: ENST00000577569
Location (hg38): chr17:16653904-16654787
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 771 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577569.1; RP11-92B11.4-001; OTTHUMT00000444121.1; NONHSAT145990
Alternative gene names: ENSG00000264765.1; RP11-92B11.4; OTTHUMG00000178960.1; AC098850.3; AC098850.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.1859 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC144A-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC144A-2:1
4.0 lnc-CCDC144A-2:1
4.1 lnc-CCDC144A-2:1
5.0 lnc-CCDC144A-2:1
5.1 lnc-GLP2R-83:1
5.2 lnc-CCDC144A-2:1