Transcript: lnc-CCDC146-1:9

Basic information

LNCipedia transcript ID: lnc-CCDC146-1:9 
LNCipedia gene ID: lnc-CCDC146-1
Location (hg38): chr7:77039480-77053038
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2332 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT121633; NR_028058
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.1018 non-coding 
CPAT coding probability 51.72% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC146-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UPK3B-1:9
4.0 lnc-CCDC146-1:9
4.1 lnc-CCDC146-1:9
5.0 lnc-CCDC146-1:9
5.1 lnc-FKBP6-93:9
5.2 lnc-CCDC146-1:9