Transcript: lnc-CCDC171-8:1

Basic information

LNCipedia transcript ID: lnc-CCDC171-8:1 
LNCipedia gene ID: lnc-CCDC171-8
Location (hg38): chr9:16216808-16219228
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2421 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT130285
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.5238 non-coding 
CPAT coding probability 42.58% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC171-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C9orf93-8:1
4.0 lnc-C9orf93-8:1
4.1 lnc-C9orf93-8:1
5.0 lnc-C9orf93-8:1
5.1 lnc-RECK-183:1
5.2 lnc-CCDC171-8:1