Transcript: lnc-CCDC182-1:2

Basic information

LNCipedia transcript ID: lnc-CCDC182-1:2 
LNCipedia gene ID: lnc-CCDC182-1
Location (hg38): chr17:57600865-57608412
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1403 bp
Exons: 3
Sources: Refseq - Dec 2014
Alternative transcript names: NR_110807
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -118.6668 non-coding 
CPAT coding probability 21.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC182-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007431.1.1-1:2
4.0 lnc-AC007431.1.1-1:2
4.1 lnc-AC007431.1.1-1:2
5.0 lnc-AC007431.1.1-1:2
5.1 lnc-PTRH2-39:2
5.2 lnc-CCDC182-1:2