Transcript: lnc-CCDC189-1:7

Basic information

LNCipedia transcript ID: lnc-CCDC189-1:7 
LNCipedia gene ID: lnc-CCDC189-1
Location (hg38): chr16:30697707-30698945
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 660 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT141802
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.7589 non-coding 
CPAT coding probability 27.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC189-1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf93-1:3
4.0 lnc-C16orf93-1:3
4.1 lnc-C16orf93-1:3
5.0 lnc-C16orf93-1:3
5.1 lnc-SULT1A2-92:7
5.2 lnc-CCDC189-1:7