Transcript: lnc-CCDC47-2:3

Basic information

LNCipedia transcript ID: lnc-CCDC47-2:3 
LNCipedia gene ID: lnc-CCDC47-2
Location (hg38): chr17:63698256-63699362
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 920 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT055215
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 149.233 coding 
CPAT coding probability 22.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC47-2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRADA-1:3
4.0 lnc-STRADA-1:3
4.1 lnc-STRADA-1:3
5.0 lnc-STRADA-1:3
5.1 lnc-CYB561-8:3
5.2 lnc-CCDC47-2:3