Transcript: lnc-CCDC47-2:4

Basic information

LNCipedia transcript ID: lnc-CCDC47-2:4 
LNCipedia gene ID: lnc-CCDC47-2
Location (hg38): chr17:63698498-63699344
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 760 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT055217
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 1051.8714 coding 
CPAT coding probability 91.40% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC47-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRADA-1:4
4.0 lnc-STRADA-1:4
4.1 lnc-STRADA-1:4
5.0 lnc-STRADA-1:4
5.1 lnc-CYB561-8:4
5.2 lnc-CCDC47-2:4