Transcript: lnc-CCDC61-2:2

Basic information

LNCipedia transcript ID: lnc-CCDC61-2:2 
LNCipedia gene ID: lnc-CCDC61-2
Ensembl Gene ID: ENSG00000268401
Ensembl Transcript ID: ENST00000601033
Location (hg38): chr19:46027869-46028489
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 518 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066840; ENST00000601033.1
Alternative gene names: ENSG00000268401.1; CTC-344H19.4; AC007785.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.0211 non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC61-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC61-2:2
4.0 lnc-CCDC61-2:2
4.1 lnc-CCDC61-2:2
5.0 lnc-CCDC61-2:2
5.1 lnc-BHMG1-7:2
5.2 lnc-CCDC61-2:2