Transcript: lnc-CCDC68-1:1

Basic information

LNCipedia transcript ID: lnc-CCDC68-1:1 
LNCipedia gene ID: lnc-CCDC68-1
Location (hg38): chr18:54890877-54897970
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 599 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026523; NONHSAT059356
Alternative gene names: XLOC_012847; linc-STARD6-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -184.7121 non-coding 
CPAT coding probability 12.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC68-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCDC68-1:1
3.1 lnc-CCDC68-1:1
4.0 lnc-CCDC68-1:1
4.1 lnc-CCDC68-1:1
5.0 lnc-CCDC68-1:1
5.1 lnc-MBD2-11:2
5.2 lnc-CCDC68-1:1