Transcript: lnc-CCDC7-12:1

Basic information

LNCipedia transcript ID: lnc-CCDC7-12:1 
LNCipedia gene ID: lnc-CCDC7-12
Location (hg38): chr10:32332526-32334690
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 564 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000111314.1|MICT00000039527.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.6678 non-coding 
CPAT coding probability 1.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC7-12:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCDC7-9:1
5.0 lnc-CCDC7-9:1
5.1 lnc-NPY4R2-174:1
5.2 lnc-CCDC7-12:1