Transcript: lnc-CCDC7-14:1

Basic information

LNCipedia transcript ID: lnc-CCDC7-14:1 
LNCipedia gene ID: lnc-CCDC7-14
Location (hg38): chr10:32998734-33001018
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 274 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_286_chr10:33287661-33289946_prostate
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.1493 non-coding 
CPAT coding probability 0.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC7-14:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf68-12:1
4.0 lnc-C10orf68-12:1
4.1 lnc-C10orf68-12:1
5.0 lnc-C10orf68-12:1
5.1 lnc-NPY4R2-166:1
5.2 lnc-CCDC7-14:1