Transcript: lnc-CCDC7-16:1

Basic information

LNCipedia transcript ID: lnc-CCDC7-16:1 
LNCipedia gene ID: lnc-CCDC7-16
Ensembl Gene ID: ENSG00000273012
Ensembl Transcript ID: ENST00000608148
Location (hg38): chr10:33341655-33341905
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 251 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000608148.1
Alternative gene names: ENSG00000273012.1; RP11-90B22.1; AL353600.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -159.8317 non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC7-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf68-13:1
4.0 lnc-C10orf68-13:1
4.1 lnc-C10orf68-13:1
5.0 lnc-C10orf68-13:1
5.1 lnc-NPY4R2-163:1
5.2 lnc-CCDC7-16:1