Transcript: lnc-CCDC7-21:2

Basic information

LNCipedia transcript ID: lnc-CCDC7-21:2 
LNCipedia gene ID: lnc-CCDC7-21
Location (hg38): chr10:33909238-33917795
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 5
Sources: Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000434552.2
Alternative gene names: ENSG00000223470.2; RP11-490O24.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.6691 non-coding 
CPAT coding probability 2.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC7-21:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf68-6:2
4.0 lnc-C10orf68-6:2
4.1 lnc-C10orf68-6:2
5.0 lnc-C10orf68-6:2
5.1 lnc-NPY4R2-157:2
5.2 lnc-CCDC7-21:2