Transcript: lnc-CCDC71L-1:13

Basic information

LNCipedia transcript ID: lnc-CCDC71L-1:13 
LNCipedia gene ID: lnc-CCDC71L-1
Location (hg38): chr7:106438377-106460731
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 10331 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000243797.2|MICT00000330775.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.8363 non-coding 
CPAT coding probability 26.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC71L-1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCDC71L-1:13
5.0 lnc-CCDC71L-1:13
5.1 lnc-NRCAM-25:14
5.2 lnc-CCDC71L-1:13