Transcript: lnc-CCDC78-1:5

Basic information

LNCipedia transcript ID: lnc-CCDC78-1:5 
LNCipedia gene ID: lnc-CCDC78-1
Location (hg38): chr16:722582-726430
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1831 bp
Exons: 12
Sources: NONCODE v4
Alternative transcript names: NONHSAT051860
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 706.9531 coding 
CPAT coding probability 99.80% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC78-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC78-1:5
4.0 lnc-CCDC78-1:5
4.1 lnc-CCDC78-1:5
5.0 lnc-CCDC78-1:5
5.1 lnc-PKMYT1-118:5
5.2 lnc-CCDC78-1:5