Transcript: lnc-CCDC78-3:3

Basic information

LNCipedia transcript ID: lnc-CCDC78-3:3 
LNCipedia gene ID: lnc-CCDC78-3
Location (hg38): chr16:733841-740997
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 960 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT051874
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -198.3527 non-coding 
CPAT coding probability 94.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCDC78-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC78-3:3
4.0 lnc-CCDC78-3:3
4.1 lnc-CCDC78-3:3
5.0 lnc-CCDC78-3:3
5.1 lnc-PKMYT1-116:2
5.2 lnc-CCDC78-3:3