Transcript: lnc-CCDC89-5:6

Basic information

LNCipedia transcript ID: lnc-CCDC89-5:6 
LNCipedia gene ID: lnc-CCDC89-5
Location (hg38): chr11:85660149-85664104
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1099 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT023440
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.1695 non-coding 
CPAT coding probability 0.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCDC89-5:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC89-5:6
4.0 lnc-CCDC89-5:6
4.1 lnc-CCDC89-5:6
5.0 lnc-CCDC89-5:6
5.1 lnc-RAB30-20:2
5.2 lnc-CCDC89-5:6