Transcript: lnc-CCK-5:1

Basic information

LNCipedia transcript ID: lnc-CCK-5:1 
LNCipedia gene ID: lnc-CCK-5
Location (hg38): chr3:41859350-41859594
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 245 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT089200
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -187.3133 non-coding 
CPAT coding probability 6.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCK-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCK-5:1
4.0 lnc-CCK-5:1
4.1 lnc-CCK-5:1
5.0 lnc-CCK-5:1
5.1 lnc-SEC22C-8:1
5.2 lnc-CCK-5:1