Transcript: lnc-CCKAR-19:1

Basic information

LNCipedia transcript ID: lnc-CCKAR-19:1 
LNCipedia gene ID: lnc-CCKAR-19
Location (hg38): chr4:30006951-30008316
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 992 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT095932
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.1935 non-coding 
CPAT coding probability 7.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCKAR-19:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-180C1.1.1-8:1
4.0 lnc-RP11-180C1.1.1-8:1
4.1 lnc-RP11-180C1.1.1-8:1
5.0 lnc-RP11-180C1.1.1-8:1
5.1 lnc-GABRA4-83:1
5.2 lnc-CCKAR-19:1