Transcript: lnc-CCL1-12:3

Basic information

LNCipedia transcript ID: lnc-CCL1-12:3 
LNCipedia gene ID: lnc-CCL1-12
Location (hg38): chr17:34071834-34077561
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 955 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT052997
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.042 non-coding 
CPAT coding probability 12.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCL1-12:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCL1-7:1
4.0 lnc-CCL1-7:1
4.1 lnc-CCL1-3:4
5.0 lnc-CCL1-3:4
5.1 lnc-SLC6A4-147:3
5.2 lnc-CCL1-12:3