Transcript: lnc-CCL4L2-1:4

Basic information

LNCipedia transcript ID: lnc-CCL4L2-1:4 
LNCipedia gene ID: lnc-CCL4L2-1
Ensembl Gene ID: ENSG00000274767
Ensembl Transcript ID: ENST00000614777
Location (hg38): chr17:36187952-36196471
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 393 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT053187; ENST00000592498.1; ENST00000614777.1
Alternative gene names: ENSG00000267488.1; AC131056.3; ENSG00000274767.1; AC243829.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -214.4983 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCL4L2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCL4L1-1:3
4.0 lnc-CCL4L1-1:3
4.1 lnc-CCL4L1-1:3
5.0 lnc-CCL4L1-1:3
5.1 lnc-RPL19-62:3
5.2 lnc-CCL4L2-1:4