Transcript: lnc-CCM2-3:1

Basic information

LNCipedia transcript ID: lnc-CCM2-3:1 
LNCipedia gene ID: lnc-CCM2-3
Location (hg38): chr7:44949547-44953205
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2149 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: l_3403_chr7:44989145-44990170_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.2858 non-coding 
CPAT coding probability 2.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCM2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCM2-3:1
4.0 lnc-CCM2-3:1
4.1 lnc-CCM2-3:1
5.0 lnc-CCM2-3:1
5.1 lnc-CCT6A-129:1
5.2 lnc-CCM2-3:1