Transcript: lnc-CCNJL-1:4

Basic information

LNCipedia transcript ID: lnc-CCNJL-1:4 
LNCipedia gene ID: lnc-CCNJL-1
Location (hg38): chr5:160280631-160342716
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 547 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT104842
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -136.591 non-coding 
CPAT coding probability 39.12% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CCNJL-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1QTNF2-1:2
4.0 lnc-CCNJL-1:4
4.1 lnc-CCNJL-1:4
5.0 lnc-CCNJL-1:4
5.1 lnc-FAM71B-35:2
5.2 lnc-CCNJL-1:4