Transcript: lnc-CCR7-2:1

Basic information

LNCipedia transcript ID: lnc-CCR7-2:1 
LNCipedia gene ID: lnc-CCR7-2
Location (hg38): chr17:40574206-40576683
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1836 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1440_chr17:38730457-38732935_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.8691 non-coding 
CPAT coding probability 3.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCR7-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCR7-2:1
4.0 lnc-CCR7-2:1
4.1 lnc-CCR7-2:1
5.0 lnc-CCR7-2:1
5.1 lnc-NR1D1-14:1
5.2 lnc-CCR7-2:1