Transcript: lnc-CCT4-1:4

Basic information

LNCipedia transcript ID: lnc-CCT4-1:4 
LNCipedia gene ID: lnc-CCT4-1
Location (hg38): chr2:62136160-62195980
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 11080 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000048686.1|MICT00000190279.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.67 non-coding 
CPAT coding probability 3.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCT4-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CCT4-1:4
5.0 lnc-CCT4-1:4
5.1 lnc-PPP4R3B-103:1
5.2 lnc-CCT4-1:4