Transcript: lnc-CCT5-22:1

Basic information

LNCipedia transcript ID: lnc-CCT5-22:1 
LNCipedia gene ID: lnc-CCT5-22
Location (hg38): chr5:9235989-9236393
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 405 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT100343
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.6347 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CCT5-22:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCT5-22:1
4.0 lnc-CCT5-22:1
4.1 lnc-CCT5-22:1
5.0 lnc-CCT5-22:1
5.1 lnc-CARD6-288:1
5.2 lnc-CCT5-22:1