Transcript: lnc-CD177-2:1

Basic information

LNCipedia transcript ID: lnc-CD177-2:1 
LNCipedia gene ID: lnc-CD177-2
RefSeq ID: NR_026881
Location (hg38): chr19:43349056-43349548
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 493 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT066596; NR_026881; NR_026881.1
Alternative gene names: PRG1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.3379 non-coding 
CPAT coding probability 1.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD177-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD177-2:1
4.0 lnc-CD177-2:1
4.1 lnc-CD177-2:1
5.0 lnc-CD177-2:1
5.1 lnc-ZNF222-40:1
5.2 lnc-CD177-2:1