Transcript: lnc-CD300A-2:1

Basic information

LNCipedia transcript ID: lnc-CD300A-2:1 
LNCipedia gene ID: lnc-CD300A-2
Location (hg38): chr17:74499924-74500834
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 911 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT055792; FPKM1_group_13333_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 22.3901 non-coding 
CPAT coding probability 2.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD300A-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD300A-2:1
4.0 lnc-CD300A-2:1
4.1 lnc-CD300A-2:1
5.0 lnc-CD300A-2:1
5.1 lnc-TMEM94-34:1
5.2 lnc-CD300A-2:1