Transcript: lnc-CD3D-6:2

Basic information

LNCipedia transcript ID: lnc-CD3D-6:2 
LNCipedia gene ID: lnc-CD3D-6
RefSeq ID: NR_046370
Location (hg38): chr11:118381220-118418815
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 519 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT024465; NR_046370; NR_046370.1
Alternative gene names: LOC100131626


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 96.9752 coding 
CPAT coding probability 11.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-CD3D-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-770J1.5.1-2:1
4.0 lnc-RP11-770J1.5.1-2:1
4.1 lnc-RP11-770J1.5.1-2:1
5.0 lnc-RP11-770J1.5.1-2:1
5.1 lnc-SCN4B-15:2
5.2 lnc-CD3D-6:2