Transcript: lnc-CD44-7:9

Basic information

LNCipedia transcript ID: lnc-CD44-7:9 
LNCipedia gene ID: lnc-CD44-7
Location (hg38): chr11:35088030-35097838
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 762 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000002023.1|ENCT00000065929.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.3746 non-coding 
CPAT coding probability 1.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-CD44-7:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CD44-7:9
5.0 lnc-CD44-7:9
5.1 lnc-CAPRIN1-20:9
5.2 lnc-CD44-7:9